=> Bootstrap dependency digest>=20010302: found digest-20190127
=> Checksum SHA1 OK for R/igraph_1.2.4.1.tar.gz
=> Checksum RMD160 OK for R/igraph_1.2.4.1.tar.gz
=> Checksum SHA512 OK for R/igraph_1.2.4.1.tar.gz
===> Installing dependencies for R-igraph-1.2.4.1nb2
==========================================================================
The following variables will affect the build process of this package,
R-igraph-1.2.4.1nb2.  Their current value is shown below:

        * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp

Based on these variables, the following variables have been set:

        * BLAS_LIBS = -lblas
        * BLAS_TYPE = netlib
        * LAPACK_LIBS = -llapack -lblas

You may want to abort the process now with CTRL-C and change the value
of variables in the first group before continuing.  Be sure to run
`/usr/bin/make clean' after the changes.
==========================================================================
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Build dependency cwrappers>=20150314: found cwrappers-20180325
=> Full dependency R-magrittr>=1.5: found R-magrittr-2.0.1
=> Full dependency R-pkgconfig>=2.0.0: found R-pkgconfig-2.0.2
=> Full dependency R>=4.0.3nb1: found R-4.0.3nb1
=> Full dependency libxml2>=2.9.10nb3: found libxml2-2.9.12
=> Full dependency gcc7>=7.0: found gcc7-7.5.0nb4
===> Skipping vulnerability checks.
WARNING: No /var/db/pkg/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'.
===> Overriding tools for R-igraph-1.2.4.1nb2
===> Extracting for R-igraph-1.2.4.1nb2
===> Patching for R-igraph-1.2.4.1nb2
=> Applying pkgsrc patches for R-igraph-1.2.4.1nb2
=> Verifying /tree/pkgsrc/math/R-igraph/patches/patch-configure
=> Applying pkgsrc patch /tree/pkgsrc/math/R-igraph/patches/patch-configure
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-configure,v 1.1 2018/05/24 22:25:17 minskim Exp $
|
|Portability fix.
|
|--- configure.orig	2018-03-10 12:30:50.000000000 +0000
|+++ configure
--------------------------
Patching file configure using Plan A...
Hunk #1 succeeded at 3499.
done
===> Creating toolchain wrappers for R-igraph-1.2.4.1nb2
===> Configuring for R-igraph-1.2.4.1nb2
=> Checking for portability problems in extracted files